Publications
- Dzwinel W, Yuen DA, Aging in Hostile Environments Modeled by Cellular Automata with Genetic Dynamics, Int. J. Modern Phys. C, vol. 16, no. 3, pp. 357-377, 2005.
- Dzwinel W, Boryczko K, Yuen DA, Modeling Mesoscopic Fluids with Discrete-Particles. Methods, Algorithms and Results, Heteroaggregate Finely Dispersed Systems of Biological Interest, in: A.M. Spasic, J.P. Hsu (Eds.), Marcel Dekker Pub. Com., New York, pp. 1-82, 2005.
- Dzwinel, W., Yuen, D.A., Boryczko, K., Ben-Zion Y., Yoshioka S., Ito, T., Nonlinear multidimensional scaling and visualization of earthquake clusters over space, time and feature space, Nonlinear Processes in Geophysics, no. 12, pp. 117-128 2005.
- Boryczko K, Dzwinel W, Yuen DA, Modeling Heterogeneous Mesoscopic Fluids in Irregular Geometries using Shared Memory Systems, Molecular Simulation, vol. 31, no. 1, pp. 45-56, 2005.
- Tomasz Aródź, Marcin Kurdziel, Tadeusz J. Popiela, Erik O. D. Sevre, David A. Yuen, A 3D Visualization System for Computer-Aided Mammogram Analysis, University of Minnesota, Research Report UMSI 2004/181, 2005.
- Tomasz Aródź, Marcin Kurdziel, Erik O. D. Sevre, David A. Yuen, A 3D Visualization System for Computer-Aided Mammogram Analysis, University of Minnesota, Research Report UMSI 2004/16, 2005.
- M. Bubak, T. Gubala, M. Kapalka, Maciej Malawski , Katarzyna Rycerz, Workflow composer and service registry for grid applications, Future Generation Computer Systems, vol. 21, no. 1, 2005, pp. 79-86.
- T. Jurczyk, B. Głut, Efficiency Aspects of Control Space Definition for the Generation of Surface Meshes, Proc. of the SIAM Conference on Computational Science and Engineering, Orlando, Florida, USA, 10 - 15 February, 2005.
- B. Głut, T. Jurczyk, Quality and efficiency of FEM mesh adaptation with respect to control space, Proc. of the SIAM Conference on Computational Science and Engineering, Orlando, Florida, USA, 10 - 15 February, 2005.
- Baliś, B., Bubak, M., Wegiel, M., A Solution for daptng Legacy Code as Wb Services, in: V. Getov, T. Kielmann (Eds.), Component Models and Systems for Grid Applications, Springer, 2005, pp. 57-75, ISBN 0-387-23351-2.
- M. Bubak, In Knowlege Grids (in polish), COMPUTERWORLD, no. 5/656, 2005, pp. 32-34, ISSN 0867-2334.
- Alda, W., Bialoskorski, M., Górecki, R., Rybicki, J., Grid Approach to Heat Transfer Simulation in Atomic-continuum Model, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 462.
- Alda, W., Balcerek, B., Dyczkowski, M., Kowaliczek, G., Polak, S., Wcisło, R., Zachara, A., Distributed Visualization System Based on WebServices, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 479.
- Bubak, M., Turała, M., Zielinski, K., CYFRONET in Grid Technologies, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 30.
- Bubak, M., Nowakowski, P., Analysis of Implementation of Next GenerationGrids Vision in FP6 Grid Technology Projects, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 31.
- Bubak, M., Fahringer, T., Hluchy, R., Hoheisel, A., Kitowski, J., Unger, S., Viano, G., Votis, K., K-WfGrid Consortium, K-WfGrid - Knowledge BAsed Workflow System for Grid Applications, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 39.
- Bubak, M., Funika, W., Baliś, B., Gubala, T., Malawski, M., Radecki, M., Rycerz, K., Smetek, M., Szepieniec, T., CYFRONET Contribution to CoreGRID: Problem Solving Environments, Tools and GRID Systems, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 45-57.
- Gubala, T., Bubak, M., Malawski, M., Rycerz, K., Abstract Workflow Composition in K-WfGrid Project Environment, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 85-92.
- Baliś, B., Bubak, M., Radecki, M., Szepieniec, T., Wismuller, R. , OCM-G - Advanced, Grid-Enabled System for On-line Application Monitoring, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 168.
- Bubak, M., Funika, W., Wismuller, R., Aródź, T., Kurdziel M., Performance Measurements for Interactive Applications in CrossGrid, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 169-175.
- Truong, H.-L., Baliś, B., Fahringer, T., Bubak, M., Adaptive and Integrated Monitoring System for Knowledge Grid Workflows, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 192.
- Funika, W., Koch, M., Dziok, D., Malony, A. D., Shende, S., Smetek, M., Wismuller, R., An Approach to the Performance Visualization of Distributed Applications, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 193-199.
- Funika, W., Janik, A., Interoperability Support for Java-oriented on-line Tools, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 200-205.
- Funika, W., Bubak, M., Smetek, M., Wismuller, R., Monitoring RMI Calls with J-OCM, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 206-214.
- Rycerz, K., Bubak, M., Malawski, M., Sloot, P., Supporting HLA-based Distributed Interactive Simulations on the Grid - Current Status, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 256.
- Jurczyk, P. Golenia, M., Malawski, M., Kurzyniec, D., Bubak, M., Sunderam, V. S., A System for Distributed Computing Based on H2O and JXTA, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 257-268.
- Baliś, B., Bubak, M., Wegiel, M., LGF: A Framework for Semi-Automated Adaptation of Legacy Code to Web Services, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 269.
- Handzlik, P., Trebacz, L., Funika, W., Smetek, M., Performance Monitoring of Java Web Service-based Applications, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 184-191.
- Krawczyk, K., Słota, R., Majewska, M., Kryza, B., Kitowski, J., Grid Organization Memory for Knowledge Management for Grid Environment, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 109-115.
- Słota, R., Nikolow, D., Skitał, Ł., Kitowski, J., Optimizing of Data Access Using Replication Technique, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 215-220.
- Słota, R., Nikolow, D., Skitał, Ł., Kitowski, J., Extended Functionalities of Virtual Storage System for the Grid Environment, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 237-240.
- Dutka, L., Nowakowski, P., Kitowski, J., Java-based Component Expert Framework for Automatic Application Builder, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 270-274.
- Boryczko, K., Dzwinel, W., The Influence of Red Blood Cell Shape on Rheology of Blood Simulated on Multiprocessor Systems, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 419-430.
- Kurdziel, M., Boryczko, K., Dzwinel, W., Parallel Clustering of Large-Scale Noisy Multidimentional Data Sets, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 448-454.
- R. Słota, D. Nikolow, Ł. Skitał, J. Kitowski, Implementation of Replication Methods in the Grid Environment, in: P.M.A. Sloot, A. G. Hoekstra, T. Priol, A. Reinefeld, M. Bubak (Eds.), Proc. of Advances in Grid Computing - EGC 2005 European Grid Conference Amsterdam, The Netherlands, February 14-16, 2005, Lecture Notes in Computer Science, no. 3470, Springer, 2005, pp. 474-484.
- Ł. Dutka, J. Kitowski, Stochastic Approach for Secondary Storage Data Access Cost, in: P.M.A. Sloot, A. G. Hoekstra, T. Priol, A. Reinefeld, M. Bubak (Eds.), Proc. of Advances in Grid Computing - EGC 2005 European Grid Conference Amsterdam, The Netherlands, February 14-16, 2005, Lecture Notes in Computer Science, no. 3470, Springer, 2005, pp. 796-804.
- M. Malawski, D. Kurzyniec, V. Sunderam, MOCCA - Towards a Distributed CCA Framework for Metacomputing, Proceedings of 19th IEEE International Parallel and Distributed Processing Symposium (IPDPS'05) - Joint Workshop on High-Performance Grid Computing & High-Level Parallel Programming Models - HIPS-HPGC, April 4-8, 2005, Denver, Colorado, USA, IEEE Computer Society Press, 2005, pp. 174a.
- M. Malawski, D. Kurzyniec, V. Sunderam, MOCCA - Towards a Distributed CCA Framework for Metacomputing, Proceedings of 19th IEEE International Parallel and Distributed Processing Symposium (IPDPS'05) - Joint Workshop on High-Performance Grid Computing & High-Level Parallel Programming Models - HIPS-HPGC, April 4-8, 2005, Denver, Colorado, USA, IEEE Computer Society Press, 2005, pp. 174a.
- B. Baliś, M. Bubak, J. Dziwisz, H.-L. Truong, T. Fahringer, Integrated Monitoring Framework for Grid Infrastructure and Application, in: P. Cunningham, M. Cunningham (Eds.), Innovation and the Knowledge Economy. Issues, Applications, Case Studies, IOS Press, 2005, pp. 269-276.
- Ł. Dutka, B. Kryza, K. Krawczyk, R. Słota, M. Majewska, L. Hluchy, J. Kitowski, Component-Expert Architecture for Supporting Grid Workflow Construction Based on Knowledge, in: P. Cunningham, M. Cunningham (Eds.), Innovation and the Knowledge Economy. Issues, Applications, Case Studies, IOS Press, 2005, pp. 239-246.
- Ł. Skitał, R. Słota, D. Nikolow, J. Kitowski, Grid Enabled Virtual Storage System Using Service Oriented Architecture, in: K. Zielinski, T. Szmuc (Eds.), Software Engineering: Evolution and Emerging Technologies, vol. 130, IOS Press, 2005, pp. 149-159.
- W. Funika, A. Janik, Interoperability of Monitoring Tools with JINEXT, in: K. Zielinski, T. Szmuc (Eds.), Software Engineering: Evolution and Emerging Technologies, vol. 130, IOS Press, 2005, pp. 184-193.
- T. Jurczyk, B. Głut, Metric 3D Surface Mesh Generation Using Coordinate Transformation Method, in: R. Tadeusiewicz, A. Ligeza, M. Szymkat (Eds.), Proc. of Computer Methods and Systems conference (CMS'05, Krakow, 14-16 November, 2005, vol. I, Oprogramowanie Naukowo-Techniczne, 2005, pp. 395-405.
- B. Głut, T. Jurczyk, P. Breitkopt, A. Rassineux, P. Villon, Geometry Decomposition Strategies for Parallel 3D Mesh Generation, in: R. Tadeusiewicz, A. Ligeza, M. Szymkat (Eds.), Proc. of Computer Methods and Systems conference (CMS'05, Krakow, 14-16 November, 2005, vol. I, Oprogramowanie Naukowo-Techniczne, 2005, pp. 442-450.
- A. Adamek, J. Kitowski, Vertex location for symbolic block decomposition method of linear polyhedron, in: R. Tadeusiewicz, A. Ligeza, M. Szymkat (Eds.), Proc. of Computer Methods and Systems conference (CMS'05, Krakow, 14-16 November, 2005, vol. I, Oprogramowanie Naukowo-Techniczne, 2005, pp. 407-418.
- Rycerz, K., Bubak, M., Malawski, M., Sloot, P., HLA Grid Based Support for Simulatin of Vascular Reconstruction, in: Sergei Gorlatch, Marco Danelutt (Eds.), Proceedings of the CoreGRID Workshop "Integrated Research in Grid Computing", November 28-30, 2005, Technical Report TR-05-22, 2005, pp. 165-174.
- Słota, R., Skitał, Ł., Nikolow, D.and Kitowski, J., Effective network utilization for data grid environments, TERENA Network Conference 2005, Poznan, Poland, 6 - 9 June 2005.
- Słota, R., Skitał, Ł, Nikolow, D.and Kitowski, J., Development of Virtual Storage System in Service Oriented Architecture, GIUG, June 13-16, Munich, Germany.
- Badia R.M., Bubak, M., Funika, W.and Smetek, M., Performance Monitoring of GRID superscalar applications with OCM-G, in: Sergei Gorlatch, Marco Danelutto (Eds.), Proceedings of the CoreGRID Workshop "Integrated Research in Grid Computing", November 28-30, 2005, Technical Report TR-05-22, 2005, pp. 229-236.
- Badia, Rosa M., Beckmann, Olav, Bubak, Marian, Caromel, Denis and Getov, Vladimir and Isaiadis, Stavros and Lazarov, Vladimir and Malawski, Maciej and Panagiotidi, Sofia and Thiyagalingam, Jeyarajan, Lightweight Grid Platform: Design Methodology, in: Sergei Gorlatch, Marco Danelutto (Eds.), CoreGRID Integration WorkShop 2005 , 2005.
- Lazar Kirchev, Minko Blyantov, Vasil Georgiev, Kiril Boyanov and Maciej Malawski and Marian Bubak and Stavros Isaiadis and Vladimir Getov , User Profiling for Lightweight Grids, in: Sergei Gorlatch, Marco Danelutto (Eds.), CoreGRID Integration WorkShop 2005 , 2005.
- W. Funika, A. Janik, Providing interoperability for Java-oriented monitoring tools with JINEXT, Proc. Int. Conf. on Computational Science 2005, pp. 158-165, Lecture Notes in Computer Science, no. 3515, Springer, 2005.
- R. Wismuller, M. Bubak, W. Funika, High-Level Application Specific Performance Analysis Using the G-PM Tool, in: Beniamino Di Martino, Dieter Kranzlmüller, Jack Dongarra (Eds.), Proc. PVM/MPI 2005, pp. 317-324, Lecture Notes in Computer Science, no. 3666, Springer, 2005.
- W. Funika, M. Koch, D. Dziok, M. Smetek, R. Wismüller, Performance Visualization of Web Services Using J-OCM and SCIRun/TAU, in: Laurence Tianruo Yang, Omer F. Rana, Beniamino Di Martino, Jack Dongarra (Eds.), Proc. HPCC 2005, pp. 666-671, Lecture Notes in Computer Science, no. 3726, Springer, 2005.
- K. Rycerz, M. Bubak, M. Malawski, P. M. A. Sloot, A Framework for HLA-Based Interactive Simulations on the Grid, SIMULATION, vol. 81, no. 1, pp. 67--76, 2005.
- P. Faliszewski, J. Jarosz, Properties of uniformly hard languages, Information Processing Letters, vol. 95, pp. 329-332, 2005.
- G. Polak, Adnotacje typow, Referat wygłoszony na XIX Forum Informatyki Teoretycznej Karpacz, 15-17 kwietnia 2005.
- W. Dzwinel, K. Boryczko, T. Aródź, M. Kurdziel, Komputerowe Metody Detekcji Nowotworow Piersi w Zdjeciach Mammograficznych, Bio-Algorithms and Med-System, vol. 1, no. 1/2, pp. 287-290, CM UJ, 2005.
- T. Aródź, Training Set in Ensemble Feature Selection for Clinicla Proteomics, Bio-Algorithms and Med-System, vol. 1, no. 1/2, pp. 107-110, CM UJ, 2005.
- T. Aródź, K. Boryczko, W. Dzwinel, M. Kurdziel, D. A. Yuen, Visual Exploration of Multidimensional Feature Space of Biological Data, IEEE Visualization 2005 - (VIS'05), 2005.
- Obliczenia wielkiej skali – problemy i perspektywy — [Large-scale computation – problems and perspectives] / Witold DZWINEL, Jacek KITOWSKI // W: Prace Komisji Nauk Technicznych. T. 1 / pod red. Ryszarda Tadeusiewicza ; Polska Akademia Umiejętności.— Kraków : PAU, 2005. — S. 115–131. — Bibliogr. s. 131
- M. Bargieł, R.A. Ford, E.M. Tory, Simulation of sedimentation of polydisperse suspensions: a particle-based approach, AIChE Journal 51 (2005) 2457-2468
- Yuen, D.A., Kadlec, B.J., Bollig, E.F., Dzwinel, W., Garbow, Z.A., da Silva, C., Clustering and Visualization of Earthquake Data in a Grid Environment, Visual Geosciences, 1-12, May, 2005 DOI 10.1007/s10069-005-0023-z
- T. Aródź, M. Kurdziel, E. O. D. Sevre, D. A. Yuen Pattern Recognition Techniques for Automatic Detection of Suspicious-looking Anomalies in Mammograms Computer Methods and Programs in Biomedicine, 79(2):135-149, Elsevier, 2005
- T. Aródź Invariant Object Recognition Using Radon-based Transform Computing and Informatics, 24(2):183-199, Slovak Academy of Sciences, 2005
- T. Aródź Boosting the Fisher Linear Discriminant with Random Feature Subsets in: Kurzyñski, M., Woźniak, M., Puchała, E., Żołnierek, A. (Eds.) "Computer Recognition Systems - CORES'05", Advances in Soft Computing, pp. 79–86, Springer, 2005
- T. Aródź Margin-based Diversity Measures for Ensemble Classifiers in: Kurzyñski, M., Woźniak, M., Puchała, E., Żołnierek, A. (Eds.) "Computer Recognition Systems - CORES'05", Advances in Soft Computing, pp. 71–78, Springer, 2005
- Tyszka J, Topa P.,: A new approach to modelling of morphogenesis of foraminiferal shells, Paleobiology, vol. 31, nr 3, pp. 526-541, Paleontological Society, 2005.
- Tyszka, J., Topa, P., Saczka, K. , State-of-the-art in modelling of foraminiferal shells: searching for an emergent model. In: Tyszka, J., Oliwkiewicz-Miklasiñska, M., Gedl, P., Kaminski, M. A., Methods and Applications in Micropalaeontology, Studia Geologica Polonica, 124: 143-157, 2005.
- B. Głut and T. Jurczyk. Definition and interpolation of discrete metric for mesh generation on 3D surfaces. Computer Science, Annual of University of Science and Technology, Kraków, 7:89-103, 2005.
- A. Adamek and B. Głut. Symbolic Block Decomposition in Hexahedral Mesh Generation. Computer Science, vol. 7, Annual of University of Science and Technology, Kraków, 2005, pp. 7-30.
- W. Funika, A. Janik, Interoperability of Monitoring-related Tools, Computer Science, vol. 7, Annual of University of Science and Technology, Kraków, 2006, pp. 63-76.
- T. Kiss, A. Harrison, B. Baliś, G. Sipos, P. Kacsuk, M. Bubak, and I.
Taylor. Towards Integration of Legacy Code Deployment Approaches.
Technical Report TR-05-22, Pisa, Italy, November 2005.
- B. Głut, T. Jurczyk, Wielokryterialna adaptacja siatek dwuwymiarowych, Mat. XIII Konferencji Informatyka w Technologii Metali, KomPlasTech2006,Szczawnica, Poland, in: D. Szeliga, M. Pietrzyk, J. Kusiak (Eds.), pp. 53-60, 2006.
- Skitał Ł., Słota R., Nikolow D., Kitowski J., Methodology for Virtual Organisation Design and Management, Talk in EGEE User Forum, 1-3 March 2006, CERN, Geneva., 2006, http://egee-intranet.web.cern.ch/egee-intranet/User-Forum/.
- R. Wcisło, R. Bigaj, Dynamic Shadow Map Regeneration with Extended Depth Buffers, Computer Vision and Graphics, International Conference, ICCVG 2004, Warsaw, Poland, September 2004, Proceedings, in: K. Wojciechowski, B. Smolka, H. Palus, R.S. Kozera, W. Skarbek, L. Noakes (Eds.), pp. 607-612, Springer, 2006.
- P. Sloot, C. Boucher, M. Bubak, A. Hoekstra, P. Plaszczak, A. Posthumus, D. van de Vijver, VIROLAB - a Virtual Laboratory for Decision Support in Viral Diseases Treatment, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 33.
- T. Gubala, M. Bubak, M. Malawski, Support for Automatic Workflow Composition Based on Ontologies in Semantic Grid Environment, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 34-40.
- R. Słota, J. Zięba, M. Majewska, B. Kryza, J. Kitowski, Ontology Alignment and Ontology Similarity for Extension of Service Ontology in Grid Environment, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 41-48.
- M. Babik, L. Hluchy, J. Kitowski, B. Kryza, WSRF2OWL-S: A Framework for Generating Semantic Descriptions of Web and Grid Services, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 49-56.
- M. Bubak, M. Kasztelnik, C. Gorka, M. Malawski, T. Gubala, Fault Tolerance and Data Synchronization in Grid Registry for Workflow Applications, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 57.
- Ł. Dutka, J. Kitowski, AAB - Automatic Service Selection Empowered by Knowledge, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 58.
- B. Kryza, J. Pieczykolan, M. Bubak, M. Majewska, R. Słota, L. Hluchy, J. Kitowski, Managing Semantic Metadata in K-Wf Grid with Grid Organizational Memory, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 66-73.
- B. Baliś, M. Bubak, J. Dziwisz, K. Rozkwitalski, S. Hurnik, GEMINI - A Universal Monitoring Framework: Concept, Design, and Firts Prototype, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 122-123.
- R. M. Badia, W. Funika, M. Smetek, M. Bubak, Integrating of the OCM-G Monitoring System into the GRID Superscalar, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 124-130.
- B. Baliś, M. bubak, K. Guzy, Fine-Grained Instrumentation and Monitoring of Legacy Applications in a Service-Oriented Environment, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 158-159.
- M. Bubak, W. Funika, D. Dziok, M. Koch, A.D. Malony, M. Smetek, R. Wismueller, Performance Visualization in Real Time Monitoring of Web Service Applications, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 160-166.
- L. Trebacz, W. Funika, P. Handzlik, M. Smetek, Monitoring Web Services with the J-OCM System, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 167-174.
- P. Swierszcz, W. Funika, Dynamic Intrumentation of Distributed Java Applications with J-OCM, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 175-181.
- G. Wianecki, M. Wojcik, W. Funika, M. Smetek, Monitoring the Distributedness of Java Applications, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 182-188.
- T. Szepieniec, M. Bubak, On-line Performance Tunning of Grid Applications - a Case Study, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 189-190.
- W. Funika, M. Bialek, P. Pegiel, Cooperative Interoperability of Debugger and Editor in Distributed Tools Environment, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 191-202.
- M. Malawski, D. Harezlak, M. Bubak, Towards Multiprotocol and Multilanguage Interoperability: Experiments with Babel and RMIX, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 266-278.
- K. Rycerz, M. Bubak, M. Malawski, P. Sloot, Multiple HLA Federate Processes in Grid Environment, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 293-294.
- M. Bubak, M. Malawski, M. Placek, Using MOCCA Component Environment for Simulation of Gold Cluster, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 295-299.
- W. Rzasa, M. Bubak, B. Baliś, T. Szepieniec, Simulation Method for Estimation of Security Overhead of Grid Applications, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 300-307.
- M. Bubak, M. Malawski, E. Richter-Was, G. Sala, T. Szymocha, Experiments with Distributed Training of Neural Networks on the Grid, in: M. Bubak, M. Turała, K. Wiatr (Eds.), Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, ACC-Cyfronet UST, 2006, Kraków, pp. 375.
- W. Funika, P. Swierszcz, Dynamic Instrumentation of Distributed Java Applications Using Bytecode Modifications, in: V. N. Alexandrow, G. D. van Albada, P. M. A. Sloot, J. Dongarra (Eds.), Proceedings of Computational Science - ICCS 2006, 6th International Conference Reading, UK, May 2006, volume II, LNCS 3992, Springer, 2006, pp. 534-541.
- B. Baliś, M. Bubak, K. Guzy, Fine-Grained Instrumentation and Monitoring of Legacy Application in a Service-Oriented Environment, in: V. N. Alexandrow, G. D. van Albada, P. M. A. Sloot, J. Dongarra (Eds.), Proceedings of Computational Science - ICCS 2006, 6th International Conference Reading, UK, May 2006, volume II, LNCS 3992, Springer, 2006, pp. 542-548.
- L. Trebacz, P. Handzlik, W. Funika, M. Smetek, Monitoring of WS-Based Applications, in: V. N. Alexandrow, G. D. van Albada, P. M. A. Sloot, J. Dongarra (Eds.), Proceedings of Computational Science - ICCS 2006, 6th International Conference Reading, UK, May 2006, volume II, LNCS 3992, Springer, 2006, pp. 549-556.
- J. Pieczykolan, B. Kryza, J. Kitowski, Semi-automatic Creation of Adapters for Legacy Application Migration to Integration Platform Using Knowledgw , in: V. N. Alexandrow, G. D. van Albada, P. M. A. Sloot, J. Dongarra (Eds.), Proceedings of Computational Science - ICCS 2006, 6th International Conference Reading, UK, May 2006, volume IV, LNCS 3994, Springer, 2006, pp. 252-259.
- R. Słota, Ł. Skitał, D. Nikolow, J. Kitowski, Algorithms for Automatic Data Replication in Grid Environment, in: Roman Wyrzykowski, Jack Dongarra, Norbert Meyer, Jerzy Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 6th International Conference, PPAM 2005, Poznan, Poland, September 11-14, 2005, Revised Selected Papers, Lecture Notes in Computer Science, 3911, Springer, 2006, pp. 707 - 714.
- M. Kuta, D. Nikolow, R. Słota, J. Kitowski, Data Access Time Estimation for the CASTOR HSM System, in: Roman Wyrzykowski, Jack Dongarra, Norbert Meyer, Jerzy Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 6th International Conference, PPAM 2005, Poznan, Poland, September 11-14, 2005, Revised Selected Papers, Lecture Notes in Computer Science, 3911, Springer, 2006, pp. 148 - 155
- B. Kryza, M. Majewska, R. Słota, J. Kitowski, Unifying Grid Metadata Representations Through Ontologies, in: Roman Wyrzykowski, Jack Dongarra, Norbert Meyer, Jerzy Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 6th International Conference, PPAM 2005, Poznan, Poland, September 11-14, 2005, Revised Selected Papers, Lecture Notes in Computer Science, 3911, Springer, 2006, pp. 683 - 690
- P. Poznañski, J. Kitowski, A Framework for Managing Large Scale Computing Fabrics and Its Computational Complexity, in: Roman Wyrzykowski, Jack Dongarra, Norbert Meyer, Jerzy Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 6th International Conference, PPAM 2005, Poznan, Poland, September 11-14, 2005, Revised Selected Papers, Lecture Notes in Computer Science, 3911, Springer, 2006, pp. 288-295
- M. Bubak, W. Funika, M. Koch, D. Dziok, A. D. Malony, M. Smetek, R. Wismuller, Towards the Performance Visualization of Web-Service Based Applications , in: Roman Wyrzykowski, Jack Dongarra, Norbert Meyer, Jerzy Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 6th International Conference, PPAM 2005, Poznan, Poland, September 11-14, 2005, Revised Selected Papers, Lecture Notes in Computer Science, 3911, Springer, 2006, pp. 108-115
- H.-L. Truong, B. Baliś, M. Bubak, J. Dziwisz, T. Fahringer, A. Hoheisel, Towards Distributed Monitoring and Performance Analysis Services in the K-WfGrid Project, in: Roman Wyrzykowski, Jack Dongarra, Norbert Meyer, Jerzy Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 6th International Conference, PPAM 2005, Poznan, Poland, September 11-14, 2005, Revised Selected Papers, Lecture Notes in Computer Science, 3911, Springer, 2006, pp. 156-163
- T. Gubala, M. Bubak, GridSpace - Semantic Programming Environment for the Grid , in: Roman Wyrzykowski, Jack Dongarra, Norbert Meyer, Jerzy Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 6th International Conference, PPAM 2005, Poznan, Poland, September 11-14, 2005, Revised Selected Papers, Lecture Notes in Computer Science, 3911, Springer, 2006, pp. 172-179
- T. Gubala, M. Bubak, M. Malawski, K. Rycerz, Semantic-Based GridWorkflow Composition, in: Roman Wyrzykowski, Jack Dongarra, Norbert Meyer, Jerzy Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 6th International Conference, PPAM 2005, Poznan, Poland, September 11-14, 2005, Revised Selected Papers, Lecture Notes in Computer Science, 3911, Springer, 2006, pp. 651-658
- P. Jurczyk, M. Golenia, M. Malawski, D. Kurzyniec, M. Bubak, V. S. Sunderam, Enabling Remote Method Invocations in Peer-to-Peer Environments: RMIX over JXTA, in: Roman Wyrzykowski, Jack Dongarra, Norbert Meyer, Jerzy Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 6th International Conference, PPAM 2005, Poznan, Poland, September 11-14, 2005, Revised Selected Papers, Lecture Notes in Computer Science, 3911, Springer, 2006, pp. 667-674
- K. Rycerz, M. Bubak, M. Malawski, P. M. A. Sloot, A Grid Service for Management of Multiple HLA Federate Processes, in: Roman Wyrzykowski, Jack Dongarra, Norbert Meyer, Jerzy Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 6th International Conference, PPAM 2005, Poznan, Poland, September 11-14, 2005, Revised Selected Papers, Lecture Notes in Computer Science, 3911, Springer, 2006, pp. 699-706
- B. Głut, T. Jurczyk, Mesh Adaptation Based on Discrete Data, in: Roman Wyrzykowski, Jack Dongarra, Norbert Meyer, Jerzy Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 6th International Conference, PPAM 2005, Poznan, Poland, September 11-14, 2005, Revised Selected Papers, Lecture Notes in Computer Science, 3911, Springer, 2006, pp. 559-566
- M. Bargieł, E.M. Tory, Simulation of sedimentation and fluidization of polydisperse suspensions via a Markov model, Chemical Engineering Science 61, No.17 (2006) 5575-5589.
- M.Bargieł, E.M. Tory, An extension of the particle-based approach to simulating the sedimentation of polydisperse suspensions, Int. J. Min. Pro. 79, No.4 (2006) 235-252.
- M. Bargieł, E.M. Tory, Stability of tridisperse suspensions, Computing and Visualization in Science, in press.
- G. Polak, J. Jarosz, Automatic Graphical User Interface Form Generation Using Template Haskell, TFP 2006 Seventh Symposium on Trends in Functional Programming University of Nottingham, UK, 19 - 21 April, 2006, in press
- B. Kryza, Ł. Skitał, J. Kitowski, M. Li, T. Itagaki, Analysis of Interoperability Issues Betwen EGEE and VEGA Grid Infrastructure, in: M. Gerndt, D. Kranzlmuller (Eds.), Proc. of High Performance Computing and Communications, Second International Conference, HPCC 2006, Munich, Germany, September 2006, LNCS 4208, Springer 2006, pp. 793-802
- Topa P., Dzwinel W., Yuen, D.A., A multiscale cellular automata model for simulating complex transportation systems , Int. J. Modern Phys. C, 17/10, 2006 (in press)
- Dzwinel W, Yuen DA, Boryczko K, Bridging diverse physical scales with the discrete-particle paradigm in modeling colloidal dynamics with mesoscopic features, Chemical Engineering Sci., 61, 2169-2185, 2006.
- Dzwinel W, Boryczko K, Yuen DA, Modeling Mesoscopic Fluids with Discrete-Particles. Methods, Algorithms and Results. W: Finely Dispersed Particles: Micro-, Nano-, and Atto-Engineering A.M. Spasic & J.P. Hsu eds., Taylor&Francis, CRC Press, 715-778, 2006
- Dzwinel, W., In Search of Cellular Automata Reproducing Chaotic Dynamics Described by Logistic Formula, Lecture Notes in Computer Science, ACRI 2006, LNCS 4173, pp. 657-666, 2006.
- T. Aródź, M. Kurdziel, T.J. Popiela, E.O.D. Sevre, D.A. Yuen Detection of Clustered Microcalcifications in Small Field Digital Mammography Computer Methods and Programs in Biomedicine, 81(1):56-65, Elsevier, 2006
- T. Aródź, D. A. Yuen, A. Z. Dudek Ensemble of Linear Models for Predicting Drug Properties Journal of Chemical Information and Modeling, 46(1):416-423, American Chemical Society, 2006
- A. Z. Dudek, T. Aródź, J. Gálvez Computational Methods in Developing Quantitative Structure-Activity Relationships (QSAR): A Review Combinatorial Chemistry & High Throughput Screening, 9(3):213-228, Bentham, 2006
- Topa P., A Cellular Automata for modelling complex river systems, S. El Yacoubi, B. Chopard, S. Bandini (eds.): ACRI 2006, Lecture Notes in Computer Science 4173, pp. 482-491, 2006.
- Topa P., Toward a two-scale cellular automata model of tumour induced angiogenesis, S. El Yacoubi, B. Chopard, S. Bandini (eds.): ACRI 2006, Lecture Notes in Computer Science 4173, pp. 337-346, 2006.
- Topa P., Dzwinel W., Yuen D., A multiscale cellular automata model for simulating complex transportation systems, International Journal of Modern Physics C, vol. 17(10), pp. 1-23, 2006.
- K. Rycerz, M. Bubak, Problem Solving Environment for Distributed Interactive Applications, in S. Gorlatch, M. Bubak, T. Priol (Eds.), proc. of the CoreGRID Integration Workshop, Oct 19-20, 2005, Krakow, Poland, ACC Cyfronet AGH, 2006, pp. 129-138
- R. M. Badia, R. Sirvent,M. Bubak, W. Funika, C. Klaus, P. Machner, M. Smetek, Perfomance Monitoring of Gris Superscalar with OCM-G/G-PM: Integration Issues, in S. Gorlatch, M. Bubak, T. Priol (Eds.), proc. of the CoreGRID Integration Workshop, Oct 19-20, 2005, Krakow, Poland, ACC Cyfronet AGH, 2006, pp.321-331
- B. Kryza, J. Pieczykolan, J. Kitowski, Grid Organizational Memory: A Versatile Solution for Ontology Management in the Grid, Proc. of e-Science 2006, Second IEEE International Conference on e-Science and Grid Computing, Dec. 4-6, 2006, Amsterdam, ISBN-0-7695-2734-5 Library of Congress 2006935674, IEEE Computer Society, Conference Publishing Services, http://www.computer.org/proceedings/
- R. Słota, J. Zięba, B. Kryza, J. Kitowski, Knowledge Evolution Supporting Automatic Workflow Composition, Proc. of e-Science 2006, Second IEEE International Conference on e-Science and Grid Computing, Dec. 4-6, 2006, Amsterdam, ISBN-0-7695-2734-5 Library of Congress 2006935674, IEEE Computer Society, Conference Publishing Services, http://www.computer.org/proceedings/
- T. Gubala, D. Herezlak, M. Bubak, M. Malawski, Tomasz Gubała, Daniel Herę¿lak, Marian Bubak, and Maciej Malawski, Semantic Composition of Scientific Workflows Based on the Petri Nets Formalism, Proc. of e-Science 2006, Second IEEE International Conference on e-Science and Grid , Computing, Dec. 4-6, 2006, Amsterdam, ISBN-0-7695-2734-5 Library of Congress 2006935674, IEEE Computer Society, Conference Publishing Services, http://www.computer.org/proceedings/
- H.-L. Truong, P. Brunner, T. Fahringer, F. Nerieri, R. Samborski, B. Baliś, M. Bubak, J. Rozkwitalski, K-WfGrid Distributed Monitoring and Performance Analysis Services for Workflows in the Grid, Proc. of e-Science 2006, Second IEEE International Conference on e-Science and Grid , Computing, Dec. 4-6, 2006, Amsterdam, ISBN-0-7695-2734-5 Library of Congress 2006935674, IEEE Computer Society, Conference Publishing Services, http://www.computer.org/proceedings/
- K. Rycerz, M. Bubak, M. Malawski, P. Sloot, Grid Support for HLA-Based Collaborative Environment for Vascular Reconstruction, Proc. of e-Science 2006, Second IEEE International Conference on e-Science and Grid , Computing, Dec. 4-6, 2006, Amsterdam, ISBN-0-7695-2734-5 Library of Congress 2006935674, IEEE Computer Society, Conference Publishing Services, http://www.computer.org/proceedings/
- W. Funika, P. Godowski, P. Pegiel, and M. Bubak,
Towards User-Defined Performance Monitoring of Distributed Java Applications, Proc. of e-Science 2006, Second IEEE International Conference on e-Science and Grid , Computing, Dec. 4-6, 2006, Amsterdam, ISBN-0-7695-2734-5 Library of Congress 2006935674, IEEE Computer Society, Conference Publishing Services, http://www.computer.org/proceedings/ - T. Jurczyk, B. Głut. Adaptive Control Space Structure for Anisotropic Mesh
Generation. Proc. of ECCOMAS CFD 2006 European Conference on Computational
Fluid Dynamics, September 5-8, Egmond aan Zee, The Netherlands, 2006. - T. Jurczyk and B. Głut. Metric 3D Surface Mesh Generation Using Delaunay Criteria. In Proc. 2006 Int. Conf. on Computational Science, number 3992
in Lecture Notes in Computer Science, Part II, pages 302-309, Reading,
England, 2006. Springer-Verlag Berling Heidelberg. - P,M.A. Sloot, A. Tirado-Ramos, I. Altintas, M. Bubak, Ch. Boucher
From Molecule to Man: Decision Support in Individualized E-Health, IEEE Computer Society; pp. 40-46, November 2006 - M, Malawski, M. Bubak, M. Placek, D. Kurzyniec, V. Sunderam
Experiments with Distributed Component Computing Across Grid Boundaries
Joint Workshops on HPC Grid Programming Environments and Components, pp.109-116, Paris, France - B. Baliś, H.-L. Truong, M. Bubak. T. Fahringer. K .Guzy, K. Rozkwitalski An Instrumentation Infrastructure for Grid Workflow Applications, GADA and ODBASE 2006, Montpellier, France, October/November 2006,
- M. Wegiel, M. Bubak, B. Baliś Fain-Grain Interoperability with Legacz Libraries Virtualized as Web Services, 15th IEEE International Symposium on High Performance Distributed Computing, pp. 27-35, Paris, France, June 19-23 2006,
- B. Baliś, M. Bubak, J. Dziwisz, K. Rozkwitalski Towards a Generic P2P Monitoring Infrastructure for Grid Resources and Applications 2nd CoreGrid Workshop on GRID and Peer to Peer Systems Architecture, LIAFA, Uniersite Paris 7, France 16-17 Jan 2006
- M. Malawski, T. Bartyñski, E. Ciepiela, J. Kocot, P. Pelczar, M. Bubak, An ADL-based Suport for CCA Components on the Grid CoreGRID Workshop on Grid Systems, Tools and Environments, 1th December 2006, Sophia Antipolis, France.
- W. Wcisło, M. Zelechowski, Hardware Based Real-time Non-Rigid Body Animation, Machine Graphics & Vision, vol. 15, no. 3/4, 2006, Institute of Computer Science Polish Academy of Sciences, 2006, pp. 659-664
- Topa P., Dzwinel W., Yuen, D.A., River systems with complex network topology modeled with fine and coarse grained cellular automata, Int. J. Modern Phys. C, (submitted) February 2006
- S. Goryczka, T. Aródź, Complex-network-based Methodology for Analysis of Biomedical Data
Bio-Algorithms and Med-Systems , 2(3):19-26, CM UJ, 2006
- Słota Renata, Majewska Marta, Kitowski Jacek, Lambert Simon, Laclavik Michal, Hluchy Ladislav, and Viano Gianni, Evaluation of Experience-based Support for Organizational Employees, in: Jie Lu, Da Ruan, Guangquan Zhang (Eds.), E-Service Intelligence. Methodologies, Technologies and Applications, Series: Studies in Computational Intelligence , Vol. 37, Springer, 2007, pp. 411-434 (book chapter)
- Bartosz Kryza, Renata Słota, Marta Majewska, Jan Pieczykolan, Jacek Kitowski, Grid organizational memory-provision of a high-level Grid abstraction layer supported by ontology alignment, Future Generation Computer Systems, 23 (3) (2007) 348-358.
- J. Kitowski, K, Boryczko, M. Bubak, W. Dzwinel, W. Funika, R. Słota, Rozwój środków i narzędzi informatyki dla potrzeb symulacji i budowy aplikacji gridowych,Pomiary Automatyka Kontrola, no. 3, Agenda Wydawnicza SIMP, 2007, pp. 26-40
- Rzasa, W., Bubak, M., Baliś, B., Szepieniec, T., Overhead verification for Cryptographically Secured Transmission on the Grid, Computing and Informatics, 26 (1) (2007) 89-101.
- M. Laclavik, M. Seleng, L. Hluchy, J. Kitowski, Yet Undiscovered Potential of the e-mail Communication, in: M. Laclavik, I. Budinska, L. Hluchy (Eds.), Proceedings of 1st Workshop on Intelligent and Knowledge Oriented Technologies, November 28-29, 2006, Bratislava, Slovakia, Equilibria, Kosice, 2007, pp. 45-50.
- K.Rycerz, A.Tirado-Ramos, A.Gualandris, S.Portegies Zwart, M.Bubak, and P.M.A. Sloot. Interactive N-Body simulations on the Grid: HLA versus MPI. International Journal of High Performance Computing Applications, Volume 21, No. 2, Summer 2007, pp.210-221
- B. Baliś, M. Bubak, K. Sterna, A. Bemben, Efficient and Reliable Execution of Legacy Codes Exposed as Services, in: Y. Shi, G. D. van Albada, P. M. A. Sloot (Eds.), Proceedings of Computational Science - ICCS 2007, 7th International Conference Beijing, China, May 2007, volume I, LNCS 4487, Springer, 2007, pp. 390-397.
- M. Majewska, B. Kryza, J. Kitowski, Translation of Common Information Model to Web Ontology Language, in: Y. Shi, G. D. van Albada, P. M. A. Sloot (Eds.), Proceedings of Computational Science - ICCS 2007, 7th International Conference Beijing, China, May 2007, volume I, LNCS 4487, Springer, 2007, pp. 414-417.
- J. Pieczykolan, Ł. Dutka, B.Kryza, K. Korcyl and J. Kitowski, Data Dispatcher for Real Time applications in Grid environment, Poster presented at 7th Int. Conf.Computational Science - ICCS 2007, Beijing, China, May 2007, adtn'l CD pp. 47-54.
- B. Głut, T. Jurczyk, and J. Kitowski. Anisotropic Volume Mesh Generation Controlled by Adaptive Metric Space. AIP Conf. Proc. Volume 908 NUMIFORM 2007, Materials Processing and Design: Modeling, Simulation and Applications, pages 233-238, June 17-21, Porto, Portugal, 2007.
- T. Jurczyk, B. Głut and P. Breitkopf. Parallel 3D Mesh Generation using Geometry Decomposition. AIP Conf. Proc. Volume 908 NUMIFORM 2007, Materials Processing and Design: Modeling, Simulation and Applications,
pages 1579-1584, June 17-21, Porto, Portugal, 2007. - M. Bubak, P. Nowakowski and S. Unger, K-WfGrid - Knowledge-Based Workflow System for Grid Application, in: M. Bubak and S. Unger (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland. The Knowledge-based Workflow System for Grid Applications, ACC Cyfronet AGH, 2007, pp. 1-12.
- T. Gubala, D. Harezlak, M. Bubak and M. Malawski, Constructing Abstract Workflows of Applications with Workflow Composition Tool, in: M. Bubak and S. Unger (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland. The Knowledge-based Workflow System for Grid Applications, ACC Cyfronet AGH, 2007, pp. 25-30.
- Ł. Dutka, J. Kitowski and S. Natanek, Constructing Automatic Application Builder - Tool for Automatic Service Selection, in: M. Bubak and S. Unger (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland. The Knowledge-based Workflow System for Grid Applications, ACC Cyfronet AGH, 2007, pp. 31-38.
- B. Baliś, M. Bubak and B. Labno, GEMINI: Generic Monitoring Infrastructure for Grid Resources and Applications, in: M. Bubak and S. Unger (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland. The Knowledge-based Workflow System for Grid Applications, ACC Cyfronet AGH, 2007, pp. 60-73.
- B. Kryza, J. Pieczykolan, M. Majewska, R. Słota, M. Babik, A. Toth, J. Kitowski and L. Hluchy, Grid Organizational Memory - Semantic Framework for Metadata Management in the Grid, in: M. Bubak and S. Unger (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland. The Knowledge-based Workflow System for Grid Applications, ACC Cyfronet AGH, 2007, pp. 74-81.
- M. Majewska, B. Kryza and J. Kitowski, On Translation Common Information Model to OWL Ontology, in: M. Bubak and S. Unger (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland. The Knowledge-based Workflow System for Grid Applications, ACC Cyfronet AGH, 2007, pp. 82-89.
- B. Kryza, J. Pieczykolan, J. Wach, M. Zuzek and J. Kitowski Peer-to-Peer Distribution Model for Grid Organizational Memory Knowledge Base, in: M. Bubak and S. Unger (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland. The Knowledge-based Workflow System for Grid Applications, ACC Cyfronet AGH, 2007, pp. 90-97.
- M. Kuta, S. Polak, B. Palacz, T. Milos, R. Słota and J. Kitowski, TeToN - a Jena-Based Tool for Text-to-Ontology Approach, in: M. Bubak and S. Unger (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland. The Knowledge-based Workflow System for Grid Applications, ACC Cyfronet AGH, 2007, pp. 98-105.
- R. Słota, J. Zięba, M. Janusz and J. Kitowski, OnTal - the Tool for Ontology Extension in Knowledge-Based Grid Systems, in: M. Bubak and S. Unger (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland. The Knowledge-based Workflow System for Grid Applications, ACC Cyfronet AGH, 2007, pp. 106-113.
- Z. Balogh, M. Seleng, M. Maliska, L. Hluchy, R. Słota, J. Zięba and J. Kitowski, Knowledge Assimilation Agent - Component for Workflow-Based Grid Service Performance Prediction, Workflow Result Estimation and Semi-Automatic Service Discovery, in: M. Bubak and S. Unger (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland. The Knowledge-based Workflow System for Grid Applications, ACC Cyfronet AGH, 2007, pp. 114-121.
- E. Gatial, B. Simo, G. Nguyen, M. Laclavik, L. Hluchy, T. Linden and B. Kryza, K-Wf Grid Portal: a Web Interface to Semantic Workflows, in: M. Bubak and S. Unger (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland. The Knowledge-based Workflow System for Grid Applications, ACC Cyfronet AGH, 2007, pp. 131-137.
- M. Bubak, M. Malawski, P. Nowakowski and S. Unger, Software Engineering Aspects of K-Wf Grid, in: M. Bubak and S. Unger (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland. The Knowledge-based Workflow System for Grid Applications, ACC Cyfronet AGH, 2007, pp. 162-169.
- Ł. Dutka, K. Korcyl, K. Zielinski, J. Kitowski, R. Słota, W. Funika, K. Bałos, Ł. Skitał and Bartosz Kryza, Interactive European Grid Environment for HEP Application with Real Time Requirements, in: M. Bubak, M. Turała, and K. Wiatr (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland, ACC Cyfronet AGH, 2007, pp. 11-20.
- B. Kryza, Ł. Dutka, R. Słota, J. Pieczykolan and J. Kitowski, GVOSF: Grid Virtual Organization Semantic Framework for Knowledge Support, in: M. Bubak, M. Turała, and K. Wiatr (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland, ACC Cyfronet AGH, 2007, pp. 104-110.
- J. T. Moscicki, M. Bubak, H-C Lee, A. Muraru and P. Sloot, Quality of Service on the Grid with User Level Scheduling, in: M. Bubak, M. Turała, and K. Wiatr (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland, ACC Cyfronet AGH, 2007, pp. 119-129.
- W. Funika, P. Godowski and P. Pegiel, Performance Visualization of Distributed Java Applications Based on J-OCM, in: M. Bubak, M. Turała, and K. Wiatr (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland, ACC Cyfronet AGH, 2007, pp. 247-254.
- Ł. Dutka, B. Palacz and J. Kitowski, IEBS- Inteligent ExaByte Storage Based on Grid Approach, in: M. Bubak, M. Turała, and K. Wiatr (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland, ACC Cyfronet AGH, 2007, pp. 304-311.
- W. Funika and P. Pegiel, GScript Editor as Part of the ViroLab Presentation Layer, in: M. Bubak, M. Turała, and K. Wiatr (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland, ACC Cyfronet AGH, 2007, pp. 320-327.
- M. Malawski, T. Bartynski, E. Ciepiela, J. Kocot, P. Pelczar and M. Bubak, A new Approach to Supporting Component Applications on Grid, in: M. Bubak, M. Turała, and K. Wiatr (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland, ACC Cyfronet AGH, 2007, pp. 328-336.
- Ł. Skitał, Ł. Dutka, K. Korcyl, M. Janusz, R. Słota and J. Kitowski, Virtual Organization Approach for Running HEP Applications in Grid Environment, in: M. Bubak, M. Turała, and K. Wiatr (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland, ACC Cyfronet AGH, 2007, pp. 483-490.
- M. Malawski, T. szepieneic, M. Kochanczyk, M. Piwowar and I. Roterman-Konieczna, The Quest for Pharmacology Active Never Born Proteins with the EUChinaGrid Project, in: M. Bubak, M. Turała, and K. Wiatr (Eds.). Proceedings of Cracow'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland, ACC Cyfronet AGH, 2007, pp.505-510.
- M. Bargieł, E.M. Tory, A five-parameter Markov model for simulating the paths of sedimenting particles, Applied Mathematical Modeling, 31, No.10
(2007) 2080-2094. - M. Bargieł, E.M. Tory, Stability of tridisperse suspensions, Comput. Visual. Sci., 10 (2007) 163-170.
- Ł. Rauch, L. Madej, T. Jurczyk and M. Pietrzyk. Complex Modelling Platform based on Digital Material Representation. Complex Systems Concurrent Engineering, part 7, pages 403-410, Springer London 2007.
- M. Bubak, D. Harezlak, P. Nowakowski, T. Gubala, M. Malawski, Appea: A Platform for Developments and Execution of Grid Applications, in: P. Cunningham and M. Cunningham (Eds.), Expanding the Knowledge Economy, Issue, Applications, Case Studies, IOS Press, 2007, pp. 123-130
- M. Bubak, T. Gubala, M. Kasztelnik, M. Malawski, P. Nowakowski, P. M. A. Sloot, Appea: Collaborative Virtual Laboratory for e-Health, in: P. Cunningham and M. Cunningham (Eds.), Expanding the Knowledge Economy, Issue, Applications, Case Studies, IOS Press, 2007, pp. 537-544
- P. M. A. Sloot, A. Tirado-Ramos, M. Bubak, Multi-Science Decision Support for HIV Drug Resistance Treatment, in: P. Cunningham and M. Cunningham (Eds.), Expanding the Knowledge Economy, Issue, Applications, Case Studies, IOS Press, 2007, pp. 597-606
- B. Kryza, Ł. Dutka, R. Słota, and J. Kitowski, Supporting Knowledge-based Dynamic Virtual Organizations with Contracts, in: P. Cunningham and M. Cunningham (Eds.), Expanding the Knowledge Economy, Issue, Applications, Case Studies, IOS Press, 2007, pp. 937-944
- W. Dzwinel, Real-world modeling - tools, methods, applications and the future of computational sciences, in: R. Tadeusiewicz, A. Ligeza, M. Szymkat (Eds.), Proc. of CMS'07 Conference (Computer Methods and Systems), 21-23 November, 2007, Krakow, Oprogramowanie Naukowo-Techniczne, 2007, pp. 43
- M. Radziszewski, and W. Alda, A parallel system for non-deterministic ray tracing, in: R. Tadeusiewicz, A. Ligeza, M. Szymkat (Eds.), Proc. of CMS'07 Conference (Computer Methods and Systems), 21-23 November, 2007, Krakow, Oprogramowanie Naukowo-Techniczne, 2007, pp.265-270
- J. Pieczykolan, Ł. Dutka, K. Korcyl, and J. Kitowski, Data Dispatcher for interactive and data-streaming applications using Grid environment, in: R. Tadeusiewicz, A. Ligeza, M. Szymkat (Eds.), Proc. of CMS'07 Conference (Computer Methods and Systems), 21-23 November, 2007, Krakow, Oprogramowanie Naukowo-Techniczne, 2007, pp. 339-344
- P. Wroblewski, K. Boryczko, and M. Kopec, Modeling surface tension of incompressible fluids by means of a modified SPH method, in: R. Tadeusiewicz, A. Ligeza, M. Szymkat (Eds.), Proc. of CMS'07 Conference (Computer Methods and Systems), 21-23 November, 2007, Krakow, Oprogramowanie Naukowo-Techniczne, 2007, pp. 389-394
- B. Baliś, M. Bubak, and M. Pelczar. From Monitoring Data to Experiment
Information -- Monitoring of Grid Scientific Workflows. In G. Fox, K.
Chiu, and R. Buyya, editors, Third IEEE International Conference on
e-Science and Grid Computing, e-Science 2007, Bangalore, India, 10-13
December 2007, pages 187-194. IEEE Computer Society, 2007. - B. Baliś, M. Bubak, and J. Wach. User-Oriented Querying over
Repositories of Data and Provenance. In G. Fox, K. Chiu, and R. Buyya,
editors, Third IEEE International Conference on e-Science and Grid
Computing, e-Science 2007, Bangalore, India, 10-13 December 2007,
pages 77-84. IEEE Computer Society, 2007. - T. Aródź, A. Z. Dudek, Multivariate Modeling and Analysis in Drug Discovery
Current Computer-Aided Drug Design, 3(4):240-247, Bentham Science, 2007 - Marek Kasztelnik, Marian Bubak, Cezary Gorka, Maciej Malawski, and Tomasz Gubala. Fault tolerant grid registry. In Thomas Fahringer Péter Kacsuk and Zsolt Németh, editors, Distributed and Parallel Systems, pages 135-144. Springer, 2007.
- Maciej Malawski, Tomasz Szepieniec, Marek Kochanczyk, Monika Piwowar, and Irena Roterman. An approach to protein folding on the grid - EUChinaGRID experience. Bio-Algorithms and Med-Systems, 3(5):45-50, 2007.
- Maciej Malawski, Marian Bubak, Francoise Baude, Denis Caromel, Ludovic Henrio, and Matthieu Morel. Interoperability of grid component models: GCM and CCA case study. In Thierry Priol and Marco Vanneschi, editors, Towards Next Generation Grids: Proceedings of the CoreGRID Symposium, pages 95-105, Rennes, France, August 2007. Springer.
- Kuta, M. - Chrzaszcz, P. - Kitowski, J., A Case Study of Algorithms for Morphosyntactic Tagging of Polish Language. In: Computing and Informatics. Vol. 26, no. 6 (2007), p. 627-647.
- Piotr Pawliczek and Witold Dzwinel, Visual analysis of multidimensional data using fast MDS algorithm, Proceedings of SPIE - Volume 6937, Photonics Applications in Astronomy, Communications, Industry, and High-Energy Physics Experiments 2007, Ryszard S. Romaniuk, Editor, 69372N (Dec. 28, 2007)
- Dzwinel, W., Can the spatially extended populations replicate the logistic map?, Automata 2007, 13th International Workshop on Cellular Automata, August 27-29, 2007, The Fields Institute, Toronto, Canada.
- P. Wróblewski, Mariusz Kopec, Krzysztof Boryczko, SPH – A comparison of Neighbor Search Methods Based on Constant Number of Neighbors and Constant Cut-off Radius, Task Quarterly 11 (3) 2007, 275-285
- W. Czech, Application of algebraic graph descriptors for clustering of real-world structures, in: ed. Ryszard S. Romaniuk, Proceedings of SPIE ; vol. 6937), Photonics applications in astronomy, communications, industry, and high- -energy physics experiments VII, 2007, article in electronic form
- Marcin Orchel, Support vector machines: heuristic of alternatives, in: SPS 2007 Signal Processing Symposium : Jachranka, May 24–26, 2007, eds. Krzysztof Kulpa, Marek Kuźniak ; Warsaw University of Technology. Institute of Electronic Systems, 2007, pp. 1-10
- Marcin Orchel, Support vector machines: heuristic of alternatives, in: Photonics applications VII in astronomy, communications, industry, and high-energy physics experiments : 21–27 May 2007, Wilga, Poland, ed. Ryszard S. Romaniuk ; The International Society for Optical Engineering. — Bellingham : SPIE, 2007, pp. 69373E-1–69373E-10
- Marcin Orchel, Support vector machines: sequential multidimensional subsolver (SMS), in: SPA 2007 : Signal Processing : Algorithms, Architectures, Arrangements, and Applications : workshop proceedings : Poznan, 7th September 2007 / IEEE – The Institute of Electrical and Electronics Engineers Inc. Region 8 – Europe, Middle East and Africa. Chapter Circuits and Systems. Poland Section, Poznan University of Technology. Faculty of Computing Science and Management. Chair of Control and System Engineering. Division of Signal Processing and Electronic Systems, Poznan University of Technology, 2007, pp. 135–140