2005

  1. Dzwinel W, Yuen DA, Aging in Hostile Environments Modeled by Cellular Automata with Genetic Dynamics, Int. J. Modern Phys. C, vol. 16, no. 3, pp. 357-377, 2005.
  2. Dzwinel W, Boryczko K, Yuen DA, Modeling Mesoscopic Fluids with Discrete-Particles. Methods, Algorithms and Results, Heteroaggregate Finely Dispersed Systems of Biological Interest, in: A.M. Spasic, J.P. Hsu (Eds.), Marcel Dekker Pub. Com., New York, pp. 1-82, 2005.
  3. Dzwinel, W., Yuen, D.A., Boryczko, K., Ben-Zion Y., Yoshioka S., Ito, T., Nonlinear multidimensional scaling and visualization of earthquake clusters over space, time and feature space, Nonlinear Processes in Geophysics, no. 12, pp. 117-128 2005.
  4. Boryczko K, Dzwinel W, Yuen DA, Modeling Heterogeneous Mesoscopic Fluids in Irregular Geometries using Shared Memory Systems, Molecular Simulation, vol. 31, no. 1, pp. 45-56, 2005.
  5. Tomasz Aródź, Marcin Kurdziel, Tadeusz J. Popiela, Erik O. D. Sevre, David A. Yuen, A 3D Visualization System for Computer-Aided Mammogram Analysis, University of Minnesota, Research Report UMSI 2004/181, 2005.
  6. Tomasz Aródź, Marcin Kurdziel, Erik O. D. Sevre, David A. Yuen, A 3D Visualization System for Computer-Aided Mammogram Analysis, University of Minnesota, Research Report UMSI 2004/16, 2005.
  7. M. Bubak, T. Gubala, M. Kapalka, Maciej Malawski , Katarzyna Rycerz, Workflow composer and service registry for grid applications, Future Generation Computer Systems, vol. 21, no. 1, 2005, pp. 79-86.
  8. T. Jurczyk, B. Głut, Efficiency Aspects of Control Space Definition for the Generation of Surface Meshes, Proc. of the SIAM Conference on Computational Science and Engineering, Orlando, Florida, USA, 10 - 15 February, 2005.
  9. B. Głut, T. Jurczyk, Quality and efficiency of FEM mesh adaptation with respect to control space, Proc. of the SIAM Conference on Computational Science and Engineering, Orlando, Florida, USA, 10 - 15 February, 2005.
  10. Baliś, B., Bubak, M., Wegiel, M., A Solution for daptng Legacy Code as Wb Services, in: V. Getov, T. Kielmann (Eds.), Component Models and Systems for Grid Applications, Springer, 2005, pp. 57-75, ISBN 0-387-23351-2.
  11. M. Bubak, In Knowlege Grids (in polish), COMPUTERWORLD, no. 5/656, 2005, pp. 32-34, ISSN 0867-2334.
  12. Alda, W., Bialoskorski, M., Górecki, R., Rybicki, J., Grid Approach to Heat Transfer Simulation in Atomic-continuum Model, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 462.
  13. Alda, W., Balcerek, B., Dyczkowski, M., Kowaliczek, G., Polak, S., Wcisło, R., Zachara, A., Distributed Visualization System Based on WebServices, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 479.
  14. Bubak, M., Turała, M., Zielinski, K., CYFRONET in Grid Technologies, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 30.
  15. Bubak, M., Nowakowski, P., Analysis of Implementation of Next GenerationGrids Vision in FP6 Grid Technology Projects, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 31.
  16. Bubak, M., Fahringer, T., Hluchy, R., Hoheisel, A., Kitowski, J., Unger, S., Viano, G., Votis, K., K-WfGrid Consortium, K-WfGrid - Knowledge BAsed Workflow System for Grid Applications, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 39.
  17. Bubak, M., Funika, W., Baliś, B., Gubala, T., Malawski, M., Radecki, M., Rycerz, K., Smetek, M., Szepieniec, T., CYFRONET Contribution to CoreGRID: Problem Solving Environments, Tools and GRID Systems, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 45-57.
  18. Gubala, T., Bubak, M., Malawski, M., Rycerz, K., Abstract Workflow Composition in K-WfGrid Project Environment, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 85-92.
  19. Baliś, B., Bubak, M., Radecki, M., Szepieniec, T., Wismuller, R. , OCM-G - Advanced, Grid-Enabled System for On-line Application Monitoring, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 168.
  20. Bubak, M., Funika, W., Wismuller, R., Aródź, T., Kurdziel M., Performance Measurements for Interactive Applications in CrossGrid, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 169-175.
  21. Truong, H.-L., Baliś, B., Fahringer, T., Bubak, M., Adaptive and Integrated Monitoring System for Knowledge Grid Workflows, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 192.
  22. Funika, W., Koch, M., Dziok, D., Malony, A. D., Shende, S., Smetek, M., Wismuller, R., An Approach to the Performance Visualization of Distributed Applications, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 193-199.
  23. Funika, W., Janik, A., Interoperability Support for Java-oriented on-line Tools, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 200-205.
  24. Funika, W., Bubak, M., Smetek, M., Wismuller, R., Monitoring RMI Calls with J-OCM, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 206-214.
  25. Rycerz, K., Bubak, M., Malawski, M., Sloot, P., Supporting HLA-based Distributed Interactive Simulations on the Grid - Current Status, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 256.
  26. Jurczyk, P. Golenia, M., Malawski, M., Kurzyniec, D., Bubak, M., Sunderam, V. S., A System for Distributed Computing Based on H2O and JXTA, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 257-268.
  27. Baliś, B., Bubak, M., Wegiel, M., LGF: A Framework for Semi-Automated Adaptation of Legacy Code to Web Services, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 269.
  28. Handzlik, P., Trebacz, L., Funika, W., Smetek, M., Performance Monitoring of Java Web Service-based Applications, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 184-191.
  29. Krawczyk, K., Słota, R., Majewska, M., Kryza, B., Kitowski, J., Grid Organization Memory for Knowledge Management for Grid Environment, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 109-115.
  30. Słota, R., Nikolow, D., Skitał, Ł., Kitowski, J., Optimizing of Data Access Using Replication Technique, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 215-220.
  31. Słota, R., Nikolow, D., Skitał, Ł., Kitowski, J., Extended Functionalities of Virtual Storage System for the Grid Environment, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 237-240.
  32. Dutka, L., Nowakowski, P., Kitowski, J., Java-based Component Expert Framework for Automatic Application Builder, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 270-274.
  33. Boryczko, K., Dzwinel, W., The Influence of Red Blood Cell Shape on Rheology of Blood Simulated on Multiprocessor Systems, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 419-430.
  34. Kurdziel, M., Boryczko, K., Dzwinel, W., Parallel Clustering of Large-Scale Noisy Multidimentional Data Sets, in: Bubak, M., Turała, M., Wiatr, K. (Eds.), Proceedings of Cracow Grid Workshop - CGW'04, December 13-15 2004, ACC-Cyfronet UST, 2005, Kraków, pp. 448-454.
  35. R. Słota, D. Nikolow, Ł. Skitał, J. Kitowski, Implementation of Replication Methods in the Grid Environment, in: P.M.A. Sloot, A. G. Hoekstra, T. Priol, A. Reinefeld, M. Bubak (Eds.), Proc. of Advances in Grid Computing - EGC 2005 European Grid Conference Amsterdam, The Netherlands, February 14-16, 2005, Lecture Notes in Computer Science, no. 3470, Springer, 2005, pp. 474-484.
  36. Ł. Dutka, J. Kitowski, Stochastic Approach for Secondary Storage Data Access Cost, in: P.M.A. Sloot, A. G. Hoekstra, T. Priol, A. Reinefeld, M. Bubak (Eds.), Proc. of Advances in Grid Computing - EGC 2005 European Grid Conference Amsterdam, The Netherlands, February 14-16, 2005, Lecture Notes in Computer Science, no. 3470, Springer, 2005, pp. 796-804.
  37. M. Malawski, D. Kurzyniec, V. Sunderam, MOCCA - Towards a Distributed CCA Framework for Metacomputing, Proceedings of 19th IEEE International Parallel and Distributed Processing Symposium (IPDPS'05) - Joint Workshop on High-Performance Grid Computing & High-Level Parallel Programming Models - HIPS-HPGC, April 4-8, 2005, Denver, Colorado, USA, IEEE Computer Society Press, 2005, pp. 174a.
  38. M. Malawski, D. Kurzyniec, V. Sunderam, MOCCA - Towards a Distributed CCA Framework for Metacomputing, Proceedings of 19th IEEE International Parallel and Distributed Processing Symposium (IPDPS'05) - Joint Workshop on High-Performance Grid Computing & High-Level Parallel Programming Models - HIPS-HPGC, April 4-8, 2005, Denver, Colorado, USA, IEEE Computer Society Press, 2005, pp. 174a.
  39. B. Baliś, M. Bubak, J. Dziwisz, H.-L. Truong, T. Fahringer, Integrated Monitoring Framework for Grid Infrastructure and Application, in: P. Cunningham, M. Cunningham (Eds.), Innovation and the Knowledge Economy. Issues, Applications, Case Studies, IOS Press, 2005, pp. 269-276.
  40. Ł. Dutka, B. Kryza, K. Krawczyk, R. Słota, M. Majewska, L. Hluchy, J. Kitowski, Component-Expert Architecture for Supporting Grid Workflow Construction Based on Knowledge, in: P. Cunningham, M. Cunningham (Eds.), Innovation and the Knowledge Economy. Issues, Applications, Case Studies, IOS Press, 2005, pp. 239-246.
  41. Ł. Skitał, R. Słota, D. Nikolow, J. Kitowski, Grid Enabled Virtual Storage System Using Service Oriented Architecture, in: K. Zielinski, T. Szmuc (Eds.), Software Engineering: Evolution and Emerging Technologies, vol. 130, IOS Press, 2005, pp. 149-159.
  42. W. Funika, A. Janik, Interoperability of Monitoring Tools with JINEXT, in: K. Zielinski, T. Szmuc (Eds.), Software Engineering: Evolution and Emerging Technologies, vol. 130, IOS Press, 2005, pp. 184-193.
  43. T. Jurczyk, B. Głut, Metric 3D Surface Mesh Generation Using Coordinate Transformation Method, in: R. Tadeusiewicz, A. Ligeza, M. Szymkat (Eds.), Proc. of Computer Methods and Systems conference (CMS'05, Krakow, 14-16 November, 2005, vol. I, Oprogramowanie Naukowo-Techniczne, 2005, pp. 395-405.
  44. B. Głut, T. Jurczyk, P. Breitkopt, A. Rassineux, P. Villon, Geometry Decomposition Strategies for Parallel 3D Mesh Generation, in: R. Tadeusiewicz, A. Ligeza, M. Szymkat (Eds.), Proc. of Computer Methods and Systems conference (CMS'05, Krakow, 14-16 November, 2005, vol. I, Oprogramowanie Naukowo-Techniczne, 2005, pp. 442-450.
  45. A. Adamek, J. Kitowski, Vertex location for symbolic block decomposition method of linear polyhedron, in: R. Tadeusiewicz, A. Ligeza, M. Szymkat (Eds.), Proc. of Computer Methods and Systems conference (CMS'05, Krakow, 14-16 November, 2005, vol. I, Oprogramowanie Naukowo-Techniczne, 2005, pp. 407-418.
  46. Rycerz, K., Bubak, M., Malawski, M., Sloot, P., HLA Grid Based Support for Simulatin of Vascular Reconstruction, in: Sergei Gorlatch, Marco Danelutt (Eds.), Proceedings of the CoreGRID Workshop "Integrated Research in Grid Computing", November 28-30, 2005, Technical Report TR-05-22, 2005, pp. 165-174.
  47. Słota, R., Skitał, Ł., Nikolow, D.and Kitowski, J., Effective network utilization for data grid environments, TERENA Network Conference 2005, Poznan, Poland, 6 - 9 June 2005.
  48. Słota, R., Skitał, Ł, Nikolow, D.and Kitowski, J., Development of Virtual Storage System in Service Oriented Architecture, GIUG, June 13-16, Munich, Germany.
  49. Badia R.M., Bubak, M., Funika, W.and Smetek, M., Performance Monitoring of GRID superscalar applications with OCM-G, in: Sergei Gorlatch, Marco Danelutto (Eds.), Proceedings of the CoreGRID Workshop "Integrated Research in Grid Computing", November 28-30, 2005, Technical Report TR-05-22, 2005, pp. 229-236.
  50. Badia, Rosa M., Beckmann, Olav, Bubak, Marian, Caromel, Denis and Getov, Vladimir and Isaiadis, Stavros and Lazarov, Vladimir and Malawski, Maciej and Panagiotidi, Sofia and Thiyagalingam, Jeyarajan, Lightweight Grid Platform: Design Methodology, in: Sergei Gorlatch, Marco Danelutto (Eds.), CoreGRID Integration WorkShop 2005 , 2005.
  51. Lazar Kirchev, Minko Blyantov, Vasil Georgiev, Kiril Boyanov and Maciej Malawski and Marian Bubak and Stavros Isaiadis and Vladimir Getov , User Profiling for Lightweight Grids, in: Sergei Gorlatch, Marco Danelutto (Eds.), CoreGRID Integration WorkShop 2005 , 2005.
  52. W. Funika, A. Janik, Providing interoperability for Java-oriented monitoring tools with JINEXT, Proc. Int. Conf. on Computational Science 2005, pp. 158-165, Lecture Notes in Computer Science, no. 3515, Springer, 2005.
  53. R. Wismuller, M. Bubak, W. Funika, High-Level Application Specific Performance Analysis Using the G-PM Tool, in: Beniamino Di Martino, Dieter Kranzlmüller, Jack Dongarra (Eds.), Proc. PVM/MPI 2005, pp. 317-324, Lecture Notes in Computer Science, no. 3666, Springer, 2005.
  54. W. Funika, M. Koch, D. Dziok, M. Smetek, R. Wismüller, Performance Visualization of Web Services Using J-OCM and SCIRun/TAU, in: Laurence Tianruo Yang, Omer F. Rana, Beniamino Di Martino, Jack Dongarra (Eds.), Proc. HPCC 2005, pp. 666-671, Lecture Notes in Computer Science, no. 3726, Springer, 2005.
  55. K. Rycerz, M. Bubak, M. Malawski, P. M. A. Sloot, A Framework for HLA-Based Interactive Simulations on the Grid, SIMULATION, vol. 81, no. 1, pp. 67--76, 2005.
  56. P. Faliszewski, J. Jarosz, Properties of uniformly hard languages, Information Processing Letters, vol. 95, pp. 329-332, 2005.
  57. G. Polak, Adnotacje typow, Referat wygłoszony na XIX Forum Informatyki Teoretycznej Karpacz, 15-17 kwietnia 2005.
  58. W. Dzwinel, K. Boryczko, T. Aródź, M. Kurdziel, Komputerowe Metody Detekcji Nowotworow Piersi w Zdjeciach Mammograficznych, Bio-Algorithms and Med-System, vol. 1, no. 1/2, pp. 287-290, CM UJ, 2005.
  59. T. Aródź, Training Set in Ensemble Feature Selection for Clinicla Proteomics, Bio-Algorithms and Med-System, vol. 1, no. 1/2, pp. 107-110, CM UJ, 2005.
  60. T. Aródź, K. Boryczko, W. Dzwinel, M. Kurdziel, D. A. Yuen, Visual Exploration of Multidimensional Feature Space of Biological Data, IEEE Visualization 2005 - (VIS'05), 2005.
  61. Obliczenia wielkiej skali – problemy i perspektywy — [Large-scale computation – problems and perspectives] / Witold DZWINEL, Jacek KITOWSKI // W: Prace Komisji Nauk Technicznych. T. 1 / pod red. Ryszarda Tadeusiewicza ; Polska Akademia Umiejętności.— Kraków : PAU, 2005. — S. 115–131. — Bibliogr. s. 131
  62. M. Bargieł, R.A. Ford, E.M. Tory, Simulation of sedimentation of polydisperse suspensions: a particle-based approach, AIChE Journal 51 (2005) 2457-2468
  63. Yuen, D.A., Kadlec, B.J., Bollig, E.F., Dzwinel, W., Garbow, Z.A., da Silva, C., Clustering and Visualization of Earthquake Data in a Grid Environment, Visual Geosciences, 1-12, May, 2005 DOI 10.1007/s10069-005-0023-z
  64. T. Aródź, M. Kurdziel, E. O. D. Sevre, D. A. Yuen Pattern Recognition Techniques for Automatic Detection of Suspicious-looking Anomalies in Mammograms Computer Methods and Programs in Biomedicine, 79(2):135-149, Elsevier, 2005
  65. T. Aródź Invariant Object Recognition Using Radon-based Transform Computing and Informatics, 24(2):183-199, Slovak Academy of Sciences, 2005
  66. T. Aródź Boosting the Fisher Linear Discriminant with Random Feature Subsets in: Kurzyñski, M., Woźniak, M., Puchała, E., Żołnierek, A. (Eds.) "Computer Recognition Systems - CORES'05", Advances in Soft Computing, pp. 79–86, Springer, 2005
  67. T. Aródź Margin-based Diversity Measures for Ensemble Classifiers in: Kurzyñski, M., Woźniak, M., Puchała, E., Żołnierek, A. (Eds.) "Computer Recognition Systems - CORES'05", Advances in Soft Computing, pp. 71–78, Springer, 2005
  68. Tyszka J, Topa P.,: A new approach to modelling of morphogenesis of foraminiferal shells, Paleobiology, vol. 31, nr 3, pp. 526-541, Paleontological Society, 2005.
  69. Tyszka, J., Topa, P., Saczka, K. , State-of-the-art in modelling of foraminiferal shells: searching for an emergent model. In: Tyszka, J., Oliwkiewicz-Miklasiñska, M., Gedl, P., Kaminski, M. A., Methods and Applications in Micropalaeontology, Studia Geologica Polonica, 124: 143-157, 2005.
  70. B. Głut and T. Jurczyk. Definition and interpolation of discrete metric for mesh generation on 3D surfaces. Computer Science, Annual of University of Science and Technology, Kraków, 7:89-103, 2005.
  71. A. Adamek and B. Głut. Symbolic Block Decomposition in Hexahedral Mesh Generation. Computer Science, vol. 7, Annual of University of Science and Technology, Kraków, 2005, pp. 7-30.
  72. W. Funika, A. Janik, Interoperability of Monitoring-related Tools, Computer Science, vol. 7, Annual of University of Science and Technology, Kraków, 2006, pp. 63-76.
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